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Food-Borne Viruses in Shellfish: Investigation on Norovirus and HAV Presence in Apulia (SE Italy)

机译:贝类中的食源性病毒:在普利亚的诺如病毒和HAV感染调查(意大利东南部)

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摘要

Shellfish are an important vehicle for transmission of food-borne pathogens including norovirus (NoV) and hepatitis A virus (HAV). The risks related with consumption of shellfish are greater if these products are eaten raw or slightly cooked. As molluscs are filter-feeding organisms, they are able to concentrate pathogens dispersed in the water. Data on shellfish viral contamination are therefore useful to obtain a background information on the presence of contamination in the environment, chiefly in shellfish production areas and to generate a picture of the epidemiology of viral pathogens in local populations. From January 2013 to July 2015, 253 samples of bivalve molluscs collected in harvesting areas from a large coastal tract (860 km) of Southern Italy were screened for HAV and NoV of genogroups GI and GII, using real-time reverse transcription qualitative PCR. The RNA of HAV was not detected in any of the analyzed samples. In contrast, the RNA of NoV was identified in 14.2% of the samples with a higher prevalence of NoVs of genogroup GII (12.2%) than genogroup GI (1.6%). Upon sequence analysis of a short diagnostic region located in capsid region, the NoV strains were characterized as GII.2, GII.4 Sydney 2012, GII.6, GII.13, GI.4, and GI.6, all which were circulating in local populations in the same time span. These data confirm that consumption of mussels can expose consumers to relevant risks of infection. Also, matching between the NoV genotypes circulating in local population and detected in molluscs confirms the diffusion in the environment of NoVs.
机译:贝类是传播包括诺如病毒(NoV)和甲型肝炎病毒(HAV)在内的食源性病原体的重要媒介。如果这些产品是生吃或稍微煮熟的,与食用贝类有关的风险就更大。由于软体动物是滤食生物,它们能够浓缩分散在水中的病原体。因此,有关贝类病毒污染的数据可用于获取有关环境(主要是贝类生产地区)中环境污染的背景信息,并有助于了解当地人群中病毒病原体的流行病学情况。从2013年1月至2015年7月,使用实时逆转录定性PCR对意大利南部一个大沿海地区(860 km)收获地区收集的253种双壳软体动物样品进行了GI和GII基因组的HAV和NoV筛查。在任何分析样品中均未检测到HAV的RNA。相反,在14.2%的样品中鉴定出NoV的RNA,其中基因组GII(12.2%)的流行率高于基因组GI(1.6%)。通过对位于衣壳区域中的短诊断区域的序列分析,将NoV菌株定性为GII.2,GII.4 Sydney 2012,GII.6,GII.13,GI.4和GI.6,它们都在循环中在同一时间范围内的本地人口中。这些数据证实食用贻贝会使消费者面临相关的感染风险。同样,在当地人群中传播的和在软体动物中检测到的NoV基因型之间的匹配证实了NoVs在环境中的扩散。

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